Hakan Kucukdereli's repositories
flir-thermal
Python wrappers to read seq files from flir thermal cameras. These functions require FLIR sciene file SDK.
CalBlitz
Blazing fast calcium imaging analysis toolbox
code
pyPhotometry code, GUI and micropython firmware
DeepLabCut
Markerless tracking of user-defined features with deep learning
DeepSlice
A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
designs_to_cut
designs for laser cuts
digitalWriteFast
Arduino library for faster digitalWrite using port manipulation and macro for ease in pin assignments.
hardware
pyPhotometry hardware
labsync
Synchronizing data between servers
matplotlib
matplotlib: plotting with Python
Miniscope_DAQ_PCB
Design, fabrication, and assembly files for the Miniscope DAQ PCB
nest-simulator
The NEST simulator
pipe
Twophoton pipeline