hiclib / iced

Normalizing Hi-C contact counts efficiently

Home Page:http://members.cbio.mines-paristech.fr/~nvaroquaux/iced/

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iced

The python module iced implements the ICE normalization of hic data

Depends on

python >= 2.7 numpy >= 1.16 scipy >= 0.19 sklearn pandas

About

Normalizing Hi-C contact counts efficiently

http://members.cbio.mines-paristech.fr/~nvaroquaux/iced/

License:Other


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Language:Python 97.8%Language:Cython 1.5%Language:Makefile 0.7%