Christopher Hempel's repositories
jab_detector_NN_pose_estimation
A project for a hackathon to detect boxing jabs in videos.
metagenomics-vs-totalRNASeq
Compares metagenomics and total RNA-Seq data-processing pieplines for microbial identification. Includes scripts to run pipelines on HPC clusters or locally, as well as scripts for statistical analysis.
metagenomics-vs-totalRNASeq-reference-comparison
A repo for my second PhD chapter
apscale
Advanced Pipeline for Simple yet Comprehensive AnaLysEs of DNA metabarcoding data
apscale_wrapper
A wrapper for the metabarcoding pipeline APSCALE to automatize the generation of apscale projects, quality control graphs, post-processing, and taxonomic annotation.
european_lakes_diversity
Contains scripts for biodiversity assessments of European lakes
exstream-metagenomics-totalrnaseq-ml
Scripts for data-processing and machine learning-based analysis of metagenomics and total RNA-Seq data from the ExStream project
mario_reinforcement_learning_NN
A project to train a NN to beat mario levels using reinforcement learning.
mitogenome_assembly_evaluation
Comparing and evaluating mitogenome assemblers
sentimental_analysis_GME_twitter
A project for a hackathon to tests if the emotions of GameStop stock (GME)-related tweets were correlated to the GME value during the GME boom on 28th January 2021.
SIREN_project
Scripts for the SIREN project