Atlas Toolbox ATT is developed to construct brain activity atlas, collect and quantify multimodal characteristics of brain areas.
You can download this toolbox from the github page. Then you need to configure environment variable in your system. If you're using a linux system, please install it under below step:
- Click Clone or download, select Download ZIP from the github page https://github.com/helloTC/ATT.
- Unzip your downloaded toolbox to one folder (with the directory as <your_directory>).
- Configure the environment variable using .bashrc, do as:
$ gedit ~/.bashrc
In .bashrc, edit it and add:
export PYTHONPATH=$PYTHONPATH:<your_directory>
Exit .bashrc, in your teminal, execute:
$ source ~/.bashrc
Now you have installed this toolbox in your python environment.
In your python environment, if you'd like to call functions in this toolbox, you can import it as other packages:
>>> from ATT.algorithms import tools
>>> tools.pearsonr?
>>> tools.pearsonr(A, B)
I'm thrilled to welcome new contributors! If you have good ideas on the framework or some specific functions, please contact with me: taicheng_huang@mail.bnu.edu.cn