heliumdatacommons

heliumdatacommons

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heliumdatacommons's repositories

auth_microservice

Microservice which abstracts out OAuth2/OpenID exchanges and token management from applications

pivot-scheduling

PIVOT simulator for research in scheduling algorithms in cross-cloud, geo-distributed environments

TOPMed_RNAseq_CWL

TOPMed RNA-seq CWL Workflow developed for Helium DataCommons

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commonsshare

CommonsShare is Helium Team's Web User Interface that explores using the cloud to access and share FAIR Biomedical big data

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documents

Helium Team Documents

docker-images

This repository stores Dockerfiles and samples to build Docker images for hms-dbmi projects.

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workflow-service

Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows

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cwl_workflows

Public Helium CWL Workflows

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data-transfer-project

The Data Transfer Project makes it easy for people to transfer their data between online service providers. We are establishing a common framework, including data models and protocols, to enable direct transfer of data both into and out of participating online service providers.

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django_irods

iRODS connector for Django / Celery

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docker-gen

Generate files from docker container meta-data

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docker-splunk

Docker Splunk Enterprise image

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Fractalis

[Back-end] A scalable open-source service for platform-independent interactive visual analysis of biomedical data

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irods-ga4gh-dos

GA4GH Data Object Service for iRODS

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irods-packages

for storing packages for iRODS builds not available in the iRODS official repos

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irods_resource_plugin_s3

Amazon Simple Storage Service (S3) resource plugin for iRODS

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network-aware-irods-api

Network Aware iRODS API

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pivot-data

Data management in PIVOT

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schema_salad

Semantic Annotations for Linked Avro Data

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toil

A scalable, efficient, cross-platform and easy-to-use workflow engine in pure Python

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topmed-workflows

a place for topmed workflows

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UserCommons

A collection of user-based workflows, workspaces, needs and wishes for Helium

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