Helge Hecht's repositories
bioconda-recipes
Conda recipes for the bioconda channel.
cubi-isa-templates
CUBI ISA-Tab templates
edamontology
EDAM is an ontology of bioscientific data analysis and data management. EDAM concentrates on topics, operations, types of data, and data formats related to analysis, modelling, optimisation, and data life-cycle in biosciences, and in other research and science-based applications.
galaxy-hub
Galaxy Community Hub
galaxytools
Set of Galaxy tool wrappers developed at RECETOX
infrastructure
All of Galaxyproject EU's cloud infrastructure.
infrastructure-playbook
Ansible playbook for managing UseGalaxy.eu infrastructure.
MS_shiny_bryjalab
Shiny application for mass spectrometry data in Bryjalab
QCxMS
Quantum mechanic mass spectrometry calculation program
recetox-aplcms
This is a custom fork of apLCMS containing adaptations for large scale studies.
RIAssigner
RIAssigner is a python tool for retention index (RI) computation for GC-MS data.
simpful-feedstock
A conda-smithy repository for simpful.
sodar-core
SODAR Core: A Django-based framework for building scientific data management web apps
sodar-docker-compose
Setup SODAR using Docker Compose
sodar-server
SODAR: System for Omics Data Access and Retrieval
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
tools-metabolomics
Galaxy tools for metabolomics maintained by Workflow4Metabolomics
tpv-shared-database
A shared database of rules for Total Perspective Vortex used by the usegalaxy.* federation.
TraceGroomer
Format and normalise tracer metabolomics given file(s), to produce the .csv files which are ready for DIMet analysis.
training-material
A collection of Galaxy-related training material
usegalaxy-eu-tools
List of tools included in https://usegalaxy.eu
website
UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)