Hanne Puype (HannePuype)

HannePuype

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Company:UGent

Location:Belgium

Twitter:@hanne_puype

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Hanne Puype's starred repositories

training

Nextflow training material

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nextflow-beginner-feb-2024

The repository used at the Beginner Nextflow course in february 2024

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scflow

Please consider using/contributing to https://github.com/nf-core/scdownstream

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scrnaseq

A single-cell RNAseq pipeline for 10X genomics data

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MATES

A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

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craTEs

Estimate the cis-regulatory activity of transposable element (TEs) subfamilies

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dictys

Context specific and dynamic gene regulatory network reconstruction and analysis

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