hanaecarrie / pysap

Python Interactive Sparse Astronomical and Magnetic Resonance Data Analysis Package

pySAP

Python Sparse data Analysis Package.

It levarages the iSAP IDL toolbox for sparsity with applications in astrophysics or MRI.

This work is made available by a community of people, amoung which the CEA Neurospin UNATI and CEA CosmoStat laboratories, in particular A. Grigis, J.-L. Starck, P. Ciuciu, and S. Farrens.

Important links

• Official source code repo: https://github.com/cea-cosmic/pysap
• HTML documentation (last stable release): http://cea-cosmic.github.io/pysap

Dependencies

The required dependencies to use the software are:

• scipy
• numpy
• matplotlib
• future
• astropy
• nibabel
• pyqtgraph
• progressbar2
• modopt

This package will generate the pysparse ISAP binding module.

Install

Make sure you have installed all the dependencies listed above properly. Further instructions are available at https://cea-cosmic.github.io/pysap/generated/installation.html

Mac OS

Help with installation on Mac OS is available here.

Linux

Please refer to the PyQtGraph homepage for issues regarding the installation of pyqtgraph.