Halle Dimsdale-Zucker's starred repositories

fmridenoise

Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.

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fmri-pipeline

python pipeline for FSL fmri data analysis that can be used on high performance computing clusters with slurm schedulers

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niseq

group sequential tests for neuroimaging

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HBN

HBN data processing code

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img2fmri

A python package for predicting group-level fMRI responses to visual stimuli using deep neural networks

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PythonResources

A list of openly available resources for learning and using the Python programming language.

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a-picture-is-worth-a-1000-words

I am trying to describe complex matters in simple doodles!

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PSC210_demos

Example code for PSC210 Fundamentals of Cognitive Neuroimaging

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roc_toolbox

ROC Toolbox for Matlab

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cleanBibImpact

Do papers using cleanBib have more gender-balanced reference lists? Assessing the impact of the cleanBib tool

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cleanBib

Probabilistically assign gender and race proportions of first/last authors pairs in bibliography entries

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balanced_citer

This python script guesses the race and gender (probabilistically) of the first and last authors for papers in your citation list (in the form of a .bib file) and compares your list to expected distributions based on a model that accounts for paper characteristics (e.g., author location, author seniority, journal, et cetera.) unrelated to race and gender.

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OptSeg_Reproducible

Simulate an experiment with optimal stimuli segmentation

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cs-for-psych

Course materials for PSYC 132: Introduction to Programming for Psychological Scientists

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denoiser

Nuisance removal tool for fMRI data

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lectures

Lecture notes for EC 607

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ed4

Computational Cognitive Neuroscience, Fourth Edition

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PythonForRUsers

Notebooks to introduce R users to Python

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brainiak-tutorials

Tutorials that cover topics from basics to advanced fMRI analysis

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brainiak

Brain Imaging Analysis Kit

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bctpy

brain connectivity toolbox for python

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Analytic-Tools

Computational Neuroscience in Python

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NLP-tutorial_psych-methods

NLP tutorial for the psych methods group at Columbia

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DartmouthMIND_tutorial

Tutorial on resting-state fMRI functional connectivity for the 2017 Dartmouth MIND summer school.

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neuroSummerSchools

List of summer schools in neuroscience and related fields

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