Functions
SPM-specific
- batch_template.m: This script is an example of how to set up a batch script for running SPM8 routines across multiple subjects. More extensive documentation here.
- generate_spm_singletrial.m: This script uses existing SPM model files to generate single-trial models, which are useful for functional connectivity or pattern similarity analyses.
- save_spm_slices.m: This script saves an image file depicting whole-brain slices with a thresholded overlay corresponding to the currently-loaded results contrast.
- save_spm_table.m: This script saves a tab-delimited text file listing cluster and peak information for the currently-loaded results contrast.
Other
- adjmat2gml.m: This function generates a GML file from a weighted adjacency matrix, for network visualization in Gephi.
- cell2csv.m: A slightly modified version of cell2csv from the Matlab File Exchange.
Dependencies
- SPM8, download from http://www.fil.ion.ucl.ac.uk/spm/software/spm8/