habeeb3579 / Opus2csv

Opus2csv is a command-line tool that allows users to convert Opus Binary Files to either CSV or Array format. When the spectra exhibit dissimilar wavenumber or wavelength datapoints, the process results in the creation of multiple CSV files. Each of these files encompasses spectra with comparable wavenumber or wavelength datapoints.

---

Opus to Array/CSV Converter

---

The Opus to Array/CSV Converter is a Python tool designed to convert Opus Binary Files to Arrays or CSV format. This tool is useful for extracting data from Opus Binary Files and storing it in a more accessible format for further analysis. It is a command-line tool that allows users to convert Opus Binary Files to either CSV or Array format. It currently supports two different storage modes (CSV and np arrays) and provides flexibility in specifying the output path.

Table of Contents

---

• Installation

• Usage

• Options

• Folder Structure

• Example

Installation

---

To install the Opus to Array Converter, follow these steps:

1. Clone the repository:

   git clone https://github.com/habeeb3579/Opus2csv.git
   

2. Change into the project directory:

   cd Opus2csv
   

3. Install the required dependencies:

   pip install -r requirements.txt
   

Usage

---

Run

python3 converter.py -h

The usage of the converter is as follows:

usage: opus2arr_converter [options] input_file

Function to Convert Opus Binary Files to Arrays or CSV

positional arguments: FOLDER_PATH Path to the folder containing Opus
Binary Files to be converted

options:

-h, ---help show this help message and exit

-m {csv,array} [{csv,array} ...], ---mode {csv,array} [{csv,array} ...]

Storage mode (csv or array) (default: array)

-o out, ---out out CSV/Array output path, the default is the current
directory (default: .)

Options

---

-h, --help: Show the help message and exit.

-m, --mode: Specify the storage mode (csv or array). Default is array.

-o, --out: Specify the output path for CSV/Array files. Default is the
current directory.

Example

---

To convert Opus Binary Files in the input_folder to CSV format, you can use the following command:

python3 convert.py input_folder -m csv -o output_folder

To convert Opus Binary Files in the input_folder to Array format, you can use the following command:

python3 convert.py input_folder -m array -o output_folder