Yuqiqo Gong (GYQ-form)

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Yuqiqo Gong's starred repositories

HERGAST

High-resolution Enhanced Relational Graph Attention Network for Spatial Transcriptomics

Language:Jupyter NotebookLicense:MITStargazers:2Issues:0Issues:0

scriabin

Analysis of cell-cell communication at single-cell resolution

Language:RLicense:NOASSERTIONStargazers:95Issues:0Issues:0

SpaTalk

Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data

Language:RLicense:GPL-3.0Stargazers:54Issues:0Issues:0

Uni-Core

an efficient distributed PyTorch framework

Language:PythonLicense:MITStargazers:113Issues:0Issues:0

RGAST

Relational Graph Attention Network for Spatial Transcriptome Analysis

Language:Jupyter NotebookLicense:MITStargazers:3Issues:0Issues:0

scBC

scBC —— a single-cell transcriptome Bayesian biClustering framework

Language:PythonLicense:MITStargazers:1Issues:0Issues:0

Helixer

Using Deep Learning to predict gene annotations

Language:PythonLicense:GPL-3.0Stargazers:155Issues:0Issues:0

info-nce-pytorch

PyTorch implementation of the InfoNCE loss for self-supervised learning.

Language:PythonLicense:MITStargazers:450Issues:0Issues:0

pretrain-gnns

Strategies for Pre-training Graph Neural Networks

Language:PythonLicense:MITStargazers:953Issues:0Issues:0
Language:PythonLicense:AGPL-3.0Stargazers:82Issues:0Issues:0

CCI

Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information

Language:PythonLicense:GPL-3.0Stargazers:19Issues:0Issues:0

tuning_playbook

A playbook for systematically maximizing the performance of deep learning models.

License:NOASSERTIONStargazers:26119Issues:0Issues:0