gyd66's repositories
17-021_RT_IpiNivo
Mutation calling code for the paper: Radiation Therapy Enhances Immunotherapy Response in Microsatellite-stable Colorectal and Pancreatic Adenocarcinoma in a Phase II Trial
awesome-drug-discovery-knowledge-graphs
A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of biomedical datasets relating to drug discovery: a knowledge graph perspective" (Briefings in Bioinformatics, 2022)
CLIPipe
CLIPipe is an integrated pipeline for analyzing CLIP sequencing data.
gcp-for-bioinformatics
GCP for Bioinformatics Researchers
gdc-docs
Official repository for GDC User Guides in Markdown format
IRIS
IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
NGS_Data_Analysis_Summer2016
Materials for NGS Data Analysis Course Summer 2016
Quantify-RNA-editing-from-bam-file
Identify RNA editing sites from mapped bam files
VAtools
A set of tools to annotate VCF files with expression and readcount data