gxwdaq

gROM

CarotidAnalyzer

A fully integrated pipeline for the extraction and analysis of carotid artery geometries.

SIMPAC-2023-139

Simulation of X-ray projections on GPU: benchmarking gVirtualXray with clinically realistic phantoms

xraySimulator

A simple x-ray simulator written in MATLAB

IGSTK

Image Guided Surgery Software Toolkit

FUnet

The official core implementation of "Spinal nerve segmentation method and dataset construction in endoscopic surgical scenarios" in MICCAI 2023

VaMPy

A collection of tools for pre-processing, simulating, and post-processing vascular morphologies.

Homepage-Anser

AnserEMT is an open-source electromagnetic tracking system

geoconv

A Python library for end-to-end learning on surfaces. It implements pre-processing functions that include geodesic algorithms, neural network layers that operate on surfaces, visualization tools and benchmarking functionalities.

CFD_Machine_Learning

voxel2mesh

Voxel2Mesh: 3D Mesh Model Generation from Volumetric Data

Femur_segmentation

proximal_femur_BMD_measurement

CT-Intensity-Calibration-Phantom-Segmentation

Detection-Of-Osteoporosis-On-Lumbar-Spine-Using-Deep-Learning

Osteoporosis

A fully automated deep learning tool for opportunistic osteoporosis screening and triage using lumbar spine radiography

3D-Lumbar-Spine-Creator

artisynth_lumbosacralSpineModel

Forward dynamic hybrid FE-MB model of the lumbosacral spine based on the Male Visible Human Project built in ArtiSynth.

SpineAI-Detect-Classify-LumbarMRI-Stenosis

Code for 2020 November Radiology Submission "Deep Learning Model for Automated Detection and Classification of Central Canal, Lateral Recess, and Neural Foraminal Stenosis at Lumbar Spine MRI"

vertebraeLocalCoordinates

Python Code to Generate a Local Coordinate System on an STL file from a Vertebrae using the VTK Library

cardiac_ml

Machine Learning for Cardiac Electrical Imaging

cardiac_challenge

Code repository for machine learning for cardiac electrophysiology

Ogo

Ogo - A library of tools for opportunistic CT, including internal calibration, segmentation, image manipulation and quantitative analysis.

Pseudo-DXA

Generative medical imaging model that produces real DXA scan from 3D body surface scan inputs. Predicting interior fat, lean, and bone distribution fom exterior body shape.

libhip

LibHip: An Open-Access Hip Joint Model Repository suitable for Finite Element Method Simulation

spine-ct-mr-registration

SynDiff

Official PyTorch implementation of SynDiff described in the paper (https://arxiv.org/abs/2207.08208).

MRI-to-CT-DCNN-TensorFlow

This repository is the implementations of the paper "MR-based Synthetic CT Generation using Deep Convolutional Neural Network Method," Medical Physics 2017.

GAN-for-Synthesizing-CT-from-T2-Weighted-MRI-data-towards-MR-guided-Radiation-Treatment

In medical domain cross modality image synthesis suffers from multiple issues such as context-misalignment, image distortion, image blurriness, and loss of details. The fundamental objective behind this study is to address these issues in estimating synthetic Computed tomography (sCT) scans from T2-weighted Magnetic Resonance Imaging (MRI) scans in order to achieve MRI-guided Radiation Treatment (RT).

ct-mr-translation

This project is about investigating the capabilities of GAN to translate spinal CT to MRI scans and vice versa.