Guillaume Huguet's repositories
competitive_gradient_descent
Re-implementation of Competitive Gradient Descent
conditional-flow-matching
TorchCFM: a Conditional Flow Matching library
ddsm
Dirichlet Diffusion Score Model for Biological Sequence Generation.
esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
examples
A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.
PyTorch-VAE
A Collection of Variational Autoencoders (VAE) in PyTorch.
theoretical-principles-for-deep-learning-UdeM-Mila-notes
Scribed notes for the [IFT6085] Deep Learning Theory course at UdeM
evodiff
Generation of protein sequences and evolutionary alignments via discrete diffusion models
GraphGPS
Recipe for a General, Powerful, Scalable Graph Transformer
oop-python
Object-Oriented Programming in Python
ott
Optimal Transport tools implemented with the JAX framework, to get auto-diff, parallel and jit-able computations.
TrajectoryNet
TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics