guatavita / IOTools

IOTools

Table of contents

• General info
• Example
• Dependencies

General info

Simple reader/writer and converters for NIfTI images and vtkPolydata

Features	Status
NIfTI reader	✅
NIfTI writer	✅
vtkPolydata reader	✅
vtkPolydata writer	✅
binary mask to polydata	✅
polydata to binary mask	✅

Bastien Rigaud, PhD Laboratoire Traitement du Signal et de l'Image (LTSI), INSERM U1099 Campus de Beaulieu, Université de Rennes 1 35042 Rennes, FRANCE [e-mail]

Example

# mask to polydata
converter = DataConverter(image=image, inval=1, outval=0, cast_float32=True)
input_features[output_key] = converter.mask_to_polydata()

# polydata to mask
input_converter = DataConverter(polydata=input_polydata, cast_float32=False)
input_mask = input_converter.polydata_to_mask()

Dependencies

pip install -r requirements.txt