shguan's repositories
gaussian_nn_tugraz
This is a repository of some researches about the link between Gaussian Process and the NN.
agp-tpf-utils
Code for manipulating AGP and TPF assembly files
AutoHiC
A novel genome assembly pipeline based on deep learning
bcdec
Small header-only C library to decompress any BC compressed image
comma10k
10k crowdsourced images for training segnets
CoverageWorkshop
A Workshop Notebook used for running a session as part of the OpenLab series.
dealii
The development repository for the deal.II finite element library.
dem_hyperelasticity
Lagrange Energy Method, Deep Energy Method employed with the Hyper-elastic constitutive model with fibre degraded feature.
exadg
ExaDG - High-Order Discontinuous Galerkin for the Exa-Scale
fem_nn
FEM enhanced neural network
guanshaoheng.github.io
Shaoheng Guan's self introduction.
KMC
Fast and frugal disk based k-mer counter
llm.c
LLM training in simple, raw C/CUDA
PretextView
OpenGL Powered Pretext Contact Map Viewer
samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
stress_strain_rotation
This is a script to verify that the principal directions of strain and stress tensor will not change under the isotropic elastic assumptions.
taichi
Productive & portable programming language for high-performance, sparse & differentiable computing on CPUs & GPUs
taichi_mpm
High-performance moving least squares material point method (MLS-MPM) solver. (ACM Transactions on Graphics, SIGGRAPH 2018)
TextBox
TextBox 2.0 is a text generation library with pre-trained language models
transformer-from-scratch
Well documented, unit tested, type checked and formatted implementation of a vanilla transformer - for educational purposes.
transformers
🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.
yahs
Yet another Hi-C scaffolding tool