Requirements ------------ Corset requires samtools to be installed. Specifically it will use the library files and headers, so these must be in a place that can be accessed by Corset. We also suggest using gcc version 4.3 or greater because some newer container classes are available in c++0x. This is not a requirement however, code compiled with an older version of gcc will run slower. Installation ------------ Compile and install in the usual way with: ./configure make make install Note that when running configure you may need to specify the locations of sam.h and libbam with: --with-bam_inc=<path_to_sam.h> and --with-bam_lib=<path_to_bam_library> Running ------- Type "corset" to get usage information. More help can be found on the website at: https://code.google.com/p/corset-project/ ---- Last Modified, N. Davidson, 11 June 2013