grenaud / schmutzi

Maximum a posteriori estimate of contamination for ancient samples

grenaud/schmutzi Issues

schmutzi.pl fails with and without prediction of the contaminant
Updated 3 months ago9
schmutzi.pl - cannot read reference base...
Closed 9 months ago4
Exit code 256 on line 22 of contDeam.pl
Closed 9 months ago2
Compilation issue on Mac OSX Silicon
Updated a year ago1
How to select BAM files for contamination estimation?
Updated a year ago3
Calmd problem
Updated a year ago1
Compile error on Centos7, fixed it by modifying two Makefiles
Closed 2 years ago4
make:error
Closed 2 years ago14
[Enhancement] JSON Metrics output
Closed 2 years ago3
issue with install for libgap
Closed 3 years ago3
contDeam.pl failing in detecting deamination
Closed 4 years ago15
Schmutzi compilation issue
Closed 4 years ago4
FASTA error: invalid refId specified
Updated 4 years ago4
Problem running the Test Data
Closed 4 years ago26
Query reference base is not the same for read ... after samtools calmd
Closed 5 years ago10
Error in schmutzi.pl script
Updated 5 years ago2
Schmutzi compilation issue with gcc 7.3.0
Closed 5 years ago1
197 Contaminant database
Closed 6 years ago1
Where is jointFreqDeaminated.R
Closed 6 years ago1
Incorrect path to poshap2splitbam in schmutzi.pl
Closed 6 years ago1
G++ Compiler Error / Bioconda packaging
Closed 6 years ago8
GCC 7.1.1 Build Error
Closed 6 years ago6
Use of uninitialized value in exponentiation (**) at [...]/contDeam.pl line 307.
Closed 6 years ago4