grbot / ga4gh-starter-kit-wes

Starter Kit server implementation of the GA4GH Workflow Execution Service (WES) specification

GA4GH Starter Kit WES

Starter Kit server implementation of the GA4GH Workflow Execution Service (WES) specification

Changelog

v0.3.2

• Bug Fix - /runs endpoints returns list of completed runs
• Bug Fix - resolve drs uri when wes and drs are running as docker containers

v0.3.1

• Bug Fix - Correct the version of nextflow that is installed in the Docker-Wes-Nextflow image

v0.3.0

• Can execute WDL-based workflows via WES. Starter Kit WES acts as a relay server between the client and a running Cromwell server. Starter Kit WES passes workflow run requests to Cromwell, and pulls data from Cromwell to report on workflow run status

v0.2.2

• Can specify that Nextflow workflow runs should be launched through Slurm execution engine via config file
• Can specify that Nextflow workflow runs should spawn Singularity containers instead of Docker containers
• Patched log4j dependencies to v2.16.0 to avoid Log4j Vulnerability