gpiantoni / gridgen

Plan, create and localize high-density ECoG grid onto the brain surface

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GRIDGEN

Python package codecov

See documentation for instructions on how to install or follow the tutorial.

Quick Start

Grid Creation

This pure-python3 package will allow you to create 3D meshes onto the convex hull (dura surface):

grid3d

You can rotate the grid:

grid3d rotation

or change the inter-electrode distance:

grid3d interelec distance

Grid Fitting

You can also use the information from the pial surface (mesh) to compute the distance to the electrodes, in different ways:

grid3d morphology grid3d morphology

This information can be used to fit the ECoG values onto the most likely area of the brain where the grid was placed.

You can compute the spatial correlation between electrodes and voxels from an fMRI:

grid3d angiogram grid3d angiogram

and based on some fMRI activity, the script will find the location where it can record the highest amount of fMRI activity:

fit sum

References

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Plan, create and localize high-density ECoG grid onto the brain surface

License:MIT License


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