google / deepsomatic

DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal sequencing data.

google/deepsomatic Issues

Output normal sample in the VCF
Updated 2 days ago1
DeepSomatic without normal data
Closed 3 months ago1
Nanopore model availability
Closed 3 months ago2
Feature request: Output normal allelic depth
Updated 4 months ago1
Performance regression with a different HCC1395 Illumina library
Updated 2 months ago10
Unsuccessful TensorSliceReader constructor: Failed to find any matching files
Closed 4 months ago6
DeepSomatic freezes after call_variants when there is 0 example
Closed 2 months ago3
Depth of coverage for WGS
Closed 7 months ago5
PacBio case study
Closed 7 months ago2
Runing on Whole exome sequencing data
Closed 7 months ago1
why no heterozygous site
Closed 7 months ago5
It does clonal vs suclonal variants?
Closed 7 months ago3
Typo in readme?
Closed 7 months ago1