Code for Gomez Lab at UNC-Chapel Hill's repositories
colorectal_predictors
Code to accompany colorectal surgery outcome predictors manuscripts
kinotype_viability
Code related to constructing and testing models for cell viability
nsqip_procedurespecific
Predict procedure specific outcomes from the NSQIP database using neural networks and logistic regression
PDACperturbations
Data and code associated with pancreatic cancer drug screening and modeling
bryant_optimization
code to expedite fluorescence data analysis
invado_population
Quantification of Invadopodia activity in cell populations
kinase_inhibitor_pred_app
Shiny application for predicting kinase inhibitor effects on cell viability
kinotypeClusteringAndRegression
Joint Repository of GR Metrics Regression and Kinase Interaction Network (KIN) Clustering
liver-glycogen-model
Code from the paper: Xu K, Morgan KT, Todd A, Elston TC and Gomez SM. A whole-body model for glycogen regulation reveals a critical role for substrate cycling in maintaining blood glucose homeostasis. PLoS Computational Biology. 2011. Dec;7(12):e1002272.
MBSAQIP_READMISSION
Using ML to predict readmission following bariatric surgery
single_invado_analysis
Quantitative Analysis of Single Invadopodia
cali_analysis
Software for the Analysis of the Effects of CALI Before/After Experiments Around the Cell Edge
focal_adhesions
Software for the Analysis of Focal Adhesion Images
kinomescan_viability_prediction
Code for processing kinomescan data for cell viability prediction
PTEN_null_essential
Code for searching a few databases for apparent essential pairs in cancer data