goldensunday

spline

c++ cubic spline library

nlopt

library for nonlinear optimization, wrapping many algorithms for global and local, constrained or unconstrained, optimization

midas-journal-800

An ITK-Based Framework for 2D-3D Registration with Multiple Fixed Images

fast-cma-es

A Python 3 gradient-free optimization library

libcmaes

libcmaes is a multithreaded C++11 library with Python bindings for high performance blackbox stochastic optimization using the CMA-ES algorithm for Covariance Matrix Adaptation Evolution Strategy

2D-3D-RegistrationTool

2D/3D Registration working with PatchedRayCast and ITK libraries using CPU it is from the framework by Bertelsen A., Borro D.

TotalSegmentator

Tool for robust segmentation of >100 important anatomical structures in CT and MR images

MRSegmentator

pycma

Python implementation of CMA-ES

prima

PRIMA is a package for solving general nonlinear optimization problems without using derivatives. It provides the reference implementation for Powell's derivative-free optimization methods, i.e., COBYLA, UOBYQA, NEWUOA, BOBYQA, and LINCOA. PRIMA means Reference Implementation for Powell's methods with Modernization and Amelioration, P for Powell.

HipHop_2D3Dregistration

2D/3D registration between CT/MRI or STL models and X-ray images (November 2018)

convexAdam

vxl

A multi-platform collection of C++ software libraries for Computer Vision and Image Understanding.

lapgm

niftyreg_bsi

The accompanying code of "Accelerating B-spline Interpolation on GPUs: Application to Medical Image Registration"

PR-GLS

Non-Rigid Point Set Registration by Preserving Global and Local Structures

gmmreg-python

Python implementation of "Robust Point Set Registration Using Gaussian Mixture Models" by Jian & Vemuri, PAMI'11

gmmreg

Implementations of the robust point set registration algorithm described in "Robust Point Set Registration Using Gaussian Mixture Models", Bing Jian and Baba C. Vemuri, IEEE Transactions on Pattern Analysis and Machine Intelligence, 2011, 33(8), pp. 1633-1645. For a Python implementation, please refer to http://github.com/bing-jian/gmmreg-python.

TPS_RPM

Reproduced a classic point matching algorithm -- Thin plate spline robust point matching(TPS-RPM).

Point-Set-Matching-Registration-Material

A list of point set matching/registration resources collected by Gang Wang

elastix

Official elastix repository

niftyreg

This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities

drop2

drop2 - intensity-based image registration

pTVreg

Deformable image registration (alignment) toolbox

FAIR.m

Flexible Algorithms for Image Registration

CNN-2D-X-Ray-Catheter-Detection

Catheter segmentation in X-Ray fluoroscopy using convolutional neural networks.

Robust-Lane-Detection

Opt-GO-3D-2D-Registration

Optimization-GradientOrientation based 3D/2D registration algorithm of medical imaging

ITKTwoProjectionRegistration

ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy

deepdrr

Code for "DeepDRR: A Catalyst for Machine Learning in Fluoroscopy-guided Procedures". https://arxiv.org/abs/1803.08606