Glen Jasper's repositories
download-papers
This scripts downloads .pdf files from formatted .xlsx files, via DOI.
format-input
This script reads the exported (.csv|.txt) files from Scopus, Web of Science, PubMed, PubMed Central, Dimensions or Google Scholar exported from Publish or Perish databases and turns each of them into a new file with an unique format. This script will ignore duplicated records.
remove-duplicates
This script eliminates the duplicated records from formatted .xlsx files from Scopus, Web of Science, PubMed, PubMed Central, Dimensions or Google Scholar exported from Publish or Perish. Is mandatory that there be at least 2 different files from 2 different databases.
glenjasper
Config files for my GitHub profile.
lbmcf-web
LBMCF website
lbmcf-web-i18n
LBMCF website
needleman-wunsch
Implementation of the Needleman-Wunsch algorithm
pdf2txt
This script converts .pdf files to .txt files.
pipeline-for-amplicon-analysis
Curso para treinamento em amplicon 16S rRNA
SciDownl
Download pdfs from Scihub via DOI. Easy to deal with captcha. Easy to update Scihub newest domains.
search-keywords
This script searches for the keywords, found in a .txt file, in the "Materials and Methods" section of each .txt file (created from .pdf files).
smith-waterman
Implementation of the Smith–Waterman algorithm
spades
SPAdes Genome Assembler
thesis
Supplementary material for the thesis.