Georgios A. Keliris's repositories

opticka

Opticka is an experiment manager built on top of the Psychophysics toolbox (PTB) for MATLAB.

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CellReg

Registration of cells across sessions.

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datajoint-tutorials

Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples

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ElectrophysiologyData

A list of openly available datasets in (mostly human) electrophysiology.

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fast-von-mises

Fast Von Mises fit

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gk2Putils

Utilities for 2P data analysis

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gks2p

Code to run suite2p in modules

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HA_time

Hyper-acuity algorithm for estimating spike timing from Calcium imaging

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mgl

A suite of mex/m files for displaying psychophysics stimuli

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mQUESTPlus

MATLAB implementation of Watson's Quest+

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mrTools

mrTools - matlab based tools for fMRI

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nhb-ndte

Code for paper Deco et al in Nature Human Behaviour 2020

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point-cloud-registration

Point Cloud Registration

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ppdev-mex

Simple mex interface to ppdev

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seqNMF

An algorithm for unsupervised discovery of sequential structure

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Violinplot-Matlab

Violin Plots for Matlab

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read_patterned_tifdata

A matlab function for rapidly reading multipage tif files with a repeating structure by guessing where the data will be. Can read standard-violating files larger than 4GB.

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scanreader

Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).

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StandardRat

A Rat fMRI standardized protocol

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suite2p

cell detection in calcium imaging recordings

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