gkaguirre lab's repositories
gkaModelEye
An anatomically accurate, ray-traced model eye in MATLAB.
transparentTrack
Determine pupil size and gaze location in IR video of the eye
preregistrations
Preregistration documents for the GKAguirre Lab
retinaTOMEAnalysis
Routines to extract retinal layer thickness values from Heidelberg OCT studies and to relate these measures to MRI/fMRI studies.
cgrpAnalysis
Analysis of Kaiser light sensitivity data
fixelTOMEAnalysis
Analysis code and Flywheel gear files for TOME fixel-based diffusion analysis
mriTOMEAnalysis
Analysis of structural and functional MRI data from the Cones-to-Cortex, Penn normal vision HCP project
BLNK_2023_Expt
Starting repo for the analysis of the trigeminal sensitivity blink data
combiAirToolbox
Arduino code and API to control active air puff device created by Vincent Lau
combiExperiments
Experiments that make use of the CombiAir and CombiLED toolboxes
combiLEDToolbox
Toolbox for the Prizmatix CombiLED light engine
flywheelMRSupport
Routines to support the analysis of structural and functional MRI data in the Flywheel environment
forwardModelWrapper
Wrapper and validation code to support compilation of the forwardModel function
fwGearBuilder
Code to assemble gears for use on the Flywheel platform
headingModel
A model of neural response to heading orientation in the forwardModel framework
Kaiser_2024_Psychophysiology
Analysis of blink response data using the BlinkCNS device
mriAGTCAnalysis
Analysis code for data fro the AGTC project
mriLDOGAnalysis
Analysis code for all projects under the LDOG protocol
MRISurfaceMappingTools
Python code and fw gear folders for MRI volume to surface mapping
Patterson_2024_JNeurosci
Analysis code for 7T data with blocked post-receptoral direction and flicker frequency stimulation
poemAnalysis
Analysis code for the Penn Online Evaluation of Migraine (POEM)
pupilLDOGAnalysis
Analysis of pupillometry data for the LDOG project
rgcTemporalSensitivity
A model of the temporal sensitivity of classes of retinal ganglion cells
t1i1Seqgen
Creation of Type 1 Index 1 sequences
temporalFittingEngine
A core computational engine, and associated models, for non-linear fitting of parametric models to time-series data
tomeMotionEnergy
Motion energy analysis of the PIXAR clips used in the connectome project
wasteSpatialFlicker
Flicker for WASTE and vasomotion studies