gilienv / EssOilDB

Restructuring of Essential Oil Database

EssOilDB

Restructuring of Essential Oil Database

DATABASE STRUCTURE

Main Objectives:

1. Separate current infoP and infoC into more rational tables - CREATE SUB TABLES - [MANISH]
2. Separate Observational Data from Factual Data [VINITA AND MANISH]
3. Create NEW Tables - for Synonyms, Bibliography and Locations [AMBARISH]

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Table1. Observations [MANISH & VINITA]

This should contain "Plant Profile data" - What plant makes what. The Table will have:

• ProfileCode (An ID that matches all compounds found in ONE SINGLE Expt)
• PlantName: (Binomial Name) or KEY
• CompoundName: IUPAC or KEY
• CompoundAmountEmitted: Percentage Value
• PlantPartEmissionSource:
• TimeOfExpt: Ususally the YEAR
• Bibliography - DOI Number
• LocationofExpt- Location

Table2. Plant Fact Table [VINITA]

This should contain EVERYTHING one may wish to know about a certain plant:

• PlantName (From Table1)
• Synonym
• Taxonomic Family
• Genus
• Species
• PlantHabit ( For eg. is this a Tree/Shrub/Herb etc)
• LinkToWiki

Table3. Compound Fact Table [VINITA]

This should contain EVERYTHING one may wish to know about a certain compound:

• CompoundName (From Table1)
• Synonym
• ChemicalFamily
• KnownBiologicalActivity
• SMILESCode
• LinkToPubChem
• LinkToWiki/CheBI/Others
• ImageOfStructure
• LinkToGene/KEGGPathway

Table4. Bibliography Table [AMBARISH]

• DOI
• Author names
• Journal Name
• Article Title
• Volume/Issue/Chapter Number
• PageNumber
• LinkToCrossRef
• DOI-LinkToArticle

Table5. Location Table [AMBARISH]

• LocationofExpt- LocationID
• Location-LinkToGoogleMaps
• Country
• State
• City/Town/Village
• Cooridinates