George Carvalho's repositories
sv-cnv-studies
:books: Relevant papers for CNV and SV approaches
snnbcourse2018
Curso de Inverno para o III Simpósio Norte-Nordeste de Bioinformática (SNNB) - 2018
bioinformatics-pipeline-tutorial
A tutorial on how to create bioinformatics pipelines as bash scripts, Makefiles and using tools like Nextflow.
Bioinformatics-Workshops
Workshops presented by the Gladstone Bioinformatics Core
ClassifyCNV
ClassifyCNV: a tool for clinical annotation of copy-number variants
docker-images
Dockerfile images I have been using
geocarvalho
Config files for my GitHub profile.
learn-julia
Some scripts from my path to learn Julia
learn-rust
Repository with study's code for Rust language
master-degree
Code used to do part of my research project
ml-studies
Annotations from my studies in machine learning
ngs-studies
Repository with learning materials related to New Generation Sequencing (NGS) analysis and processing
pgx-wf
Nextflow workflow for PGx analysis
r-bioinfo-ds
Repository to improve my abilities with R language focus on data science and bioinformatics
raredisease
Call and score variants from WGS/WES of rare disease patients.
REViewer
A tool for visualizing alignments of reads in regions containing tandem repeats
rnaseq-mendelian-tutorial
RNA-seq for Mendelian Disease Diagnostics
rnaseq_wf_tutorial
RNAseq workflow tutorial
smake-studies
Repository with codes used to study snakemake
ssdp_plus
SSDP+ is an evolutionary approach for mining diverse and more informative subgroups focused on high dimensional data sets.
stranger
Tool to annotate outfiles from ExpansionHunter with the pathologic implications of the repeat
SURVIVOR
Toolset for SV simulation, comparison and filtering