genostack's repositories

awesome-local-ai

An awesome repository of local AI tools

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biopipen

A set of processes/pipelines for bioinformatics

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CUDASW4

CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search

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DeepSeek-Coder

DeepSeek Coder: Let the Code Write Itself

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Deneb-Showcase

A collection of advanced dataviz examples using Vega, Vega-Lite, Deneb and Power BI.

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fastRAG

Efficient Retrieval Augmentation and Generation Framework

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GeoAB

This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)

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gptstudio

GPT RStudio addins that enable GPT assisted coding, writing & analysis

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harlequin

The SQL IDE for Your Terminal.

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hibou

Hibou: Foundational Models for Pathology

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iSEE

R/shiny interface for interactive visualization of data in SummarizedExperiment objects

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katib

Automated Machine Learning on Kubernetes

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lida

Automatic Generation of Visualizations and Infographics using Large Language Models

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luigi

Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.

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martian

Language and framework for high performance computational pipelines.

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MaxKB

💬 基于 LLM 大语言模型的知识库问答系统。开箱即用,支持快速嵌入到第三方业务系统,1Panel 官方出品。

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mercury

Convert Jupyter Notebooks to Web Apps

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nifi

Apache NiFi

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openscope_databook

OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈

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panelize

A Quarto Extension that formats code cells into a tabset panel, displaying static and interactive code cells side-by-side with code cell options.

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plotai

PlotAI - Your Ultimate Plotting Assistant! 📊🤖 Use ChatGPT-3.5 to create plots in Python and Matplotlib directly in your Python script or notebook.

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presto

Fast Wilcoxon and auROC

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pypalettes

A large collection of matplotlib color maps

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querybook

Querybook is a Big Data Querying UI, combining collocated table metadata and a simple notebook interface.

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redpanda

Redpanda is a streaming data platform for developers. Kafka API compatible. 10x faster. No ZooKeeper. No JVM!

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scEval

Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.

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thread

AI-Powered Jupyter Notebook built using React

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unitycatalog

Open, Multi-modal Catalog for Data & AI

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VinaDock-Notebooks

Cloud-based molecular docking for everyone

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