genostack's repositories
awesome-local-ai
An awesome repository of local AI tools
biopipen
A set of processes/pipelines for bioinformatics
CUDASW4
CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search
DeepSeek-Coder
DeepSeek Coder: Let the Code Write Itself
Deneb-Showcase
A collection of advanced dataviz examples using Vega, Vega-Lite, Deneb and Power BI.
fastRAG
Efficient Retrieval Augmentation and Generation Framework
GeoAB
This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)
gptstudio
GPT RStudio addins that enable GPT assisted coding, writing & analysis
harlequin
The SQL IDE for Your Terminal.
hibou
Hibou: Foundational Models for Pathology
iSEE
R/shiny interface for interactive visualization of data in SummarizedExperiment objects
katib
Automated Machine Learning on Kubernetes
lida
Automatic Generation of Visualizations and Infographics using Large Language Models
luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
martian
Language and framework for high performance computational pipelines.
MaxKB
💬 基于 LLM 大语言模型的知识库问答系统。开箱即用，支持快速嵌入到第三方业务系统，1Panel 官方出品。
mercury
Convert Jupyter Notebooks to Web Apps
nifi
Apache NiFi
openscope_databook
OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈
panelize
A Quarto Extension that formats code cells into a tabset panel, displaying static and interactive code cells side-by-side with code cell options.
plotai
PlotAI - Your Ultimate Plotting Assistant! 📊🤖 Use ChatGPT-3.5 to create plots in Python and Matplotlib directly in your Python script or notebook.
presto
Fast Wilcoxon and auROC
pypalettes
A large collection of matplotlib color maps
querybook
Querybook is a Big Data Querying UI, combining collocated table metadata and a simple notebook interface.
redpanda
Redpanda is a streaming data platform for developers. Kafka API compatible. 10x faster. No ZooKeeper. No JVM!
scEval
Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.
thread
AI-Powered Jupyter Notebook built using React
unitycatalog
Open, Multi-modal Catalog for Data & AI
VinaDock-Notebooks
Cloud-based molecular docking for everyone