gatsby2016

Chaoyang Yan's repositories

Augmentation-PyTorch-Transforms

Image data augmentation on-the-fly by add new class on transforms in PyTorch and torchvision.

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FeatsVisDL

Attention \ Saliency maps and features visualization for deep learning models in pytorch

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Fast-WSI-Prediction

Unofficial implementation for ScanNet (a fast WSI prediction method) in PyTorch.

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Pathological-Multi-Task-on-Prior

The official implementation of Prior-aware CNN with Multi-Task Learning for Colon Images Analysis (Oral Presentation, ISBI2020)

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Scale-Slice-awareNet

The offical implementation of the network architecture: Scale- and Slice- aware Network for 3D segmentation of organs and musculoskeletal structures in pelvic MRI

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DLforWSI

An effective deep learning classification framework for whole slide images.

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cama_summer_school_2017

杭电 CAMA-LAB 机器学习暑期研讨班

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cfDNApipe

cfDNApipe: A comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data

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coding4bioinfo

coding test for bioinfo.

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gatsby2016.github.io

Personal Blog site

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LaneATT

Code for the paper entitled "Keep your Eyes on the Lane: Real-time Attention-guided Lane Detection" (CVPR 2021)

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medpy

Medical image processing in Python

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PhiHER2

[ISMB 2024] Official PyTorch Code for "PhiHER2: Phenotype-informed weakly supervised model for HER2 status prediction from WSIs"

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sc_MTOP

sc-MTOP is an analysis framework based on DL and CP. This framework aims to characterize the tumor ecosystem diversity at the single-cell level.

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skills-code-with-codespaces

My clone repository

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