gaozhy's repositories
npy-matlab
Experimental code to read/write NumPy .NPY files in MATLAB
pyGLMdenoise
python implementation of GLMdenoise
bctpy
brain connectivity toolbox for python
dimensionality
Estimating the functional dimensionality of neural representations
easy-optimize-x
GUI-based MATLAB software for optimizing the design of fMRI tasks
fmriflows
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
interpretable-ml-book
Book about interpretable machine learning
kivisaari2019
Analysis code relating to Kivisaari et al. 2018: The brain reconstructs bits of information into rich meaningful representations
MediationToolbox
Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mapping of mediation effects across the brain) and multivariate mediation.
MultipleComparisonsPermutationTesting
Code to perform FWE-correction for multiple comparisons using permutation testing (see Nichols & Holmes, 2001)
Neuroscience-Information-Theory-Toolbox
A MATLAB toolbox for performing information theory analyses of neuroscience data
psych10-book
Source files for Statistical Thinking For the 21st Century
pybetaseries
Python implementation of beta series extraction for fMRI data
scripts
semantic relationship fMRI related scripts
tedana
TE-dependent analysis of multi-echo fMRI
workMem
working memory, remember two letters in one string