gangcai

enchanted

Enchanted is iOS and macOS app for chatting with private self hosted language models such as Llama2, Mistral or Vicuna using Ollama.

ollama

Get up and running with Llama 3, Mistral, Gemma, and other large language models.

efficient-kan

An efficient pure-PyTorch implementation of Kolmogorov-Arnold Network (KAN).

awesome-kan

A comprehensive collection of KAN(Kolmogorov-Arnold Network)-related resources, including libraries, projects, tutorials, papers, and more, for researchers and developers in the Kolmogorov-Arnold Network field.

pykan

Kolmogorov Arnold Networks

pymol-open-source

Open-source foundation of the user-sponsored PyMOL molecular visualization system.

agop_feature_learning

genevector

Vector representations of gene co-expression in single cell RNAseq.

RMySQL

Legacy DBI interface for MySQL

scGPT

Awesome-LLM

Awesome-LLM: a curated list of Large Language Model

pytensor

PyTensor allows you to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.

datasets

Images and other data from the JUMP Cell Painting Consortium

CEFCON

Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

cellot

Learning Single-Cell Perturbation Responses using Neural Optimal Transport

GEARS

GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations

scenicplus

SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.

GNNPapers

Must-read papers on graph neural networks (GNN)

Graph_Transformer_Networks

Graph Transformer Networks (Authors' PyTorch implementation for the NeurIPS 19 paper)

awesome-graph-transformer

Papers about graph transformers.

Tools-to-Design-or-Visualize-Architecture-of-Neural-Network

Tools to Design or Visualize Architecture of Neural Network

sympy

A computer algebra system written in pure Python

evcxr

private-gpt

Interact with your documents using the power of GPT, 100% privately, no data leaks

progen

Official release of the ProGen models

BioMedLM

cellxgene

An interactive explorer for single-cell transcriptomics data

SComatic

A tool for detecting somatic variants in single cell data

RFdiffusion

Code for running RFdiffusion