Giters
gamcil
/
clinker
Gene cluster comparison figure generator
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Stargazers:
505
Watchers:
14
Issues:
86
Forks:
65
gamcil/clinker Issues
try example encouter error
Updated
5 months ago
Problem with -gf and -cm parameteres
Updated
5 months ago
Comments count
3
The output result has no information
Closed
5 months ago
Comments count
2
Error in plot Visualization
Updated
6 months ago
Comments count
5
-gf/--gene_functions not working?
Closed
7 months ago
Possible bug in cluster similarity output (-mo option)
Updated
7 months ago
some issues for -mo --matrix_out parameter
Updated
7 months ago
Comments count
2
Locus inversion showing incorrect locations
Updated
7 months ago
Clinker just stalls without producing output?
Updated
a year ago
Comments count
6
Errors in using gff and faa file
Updated
a year ago
Error in clinker HTML plotting function
Updated
a year ago
GFF+Fasta files without line wrapping doesn't display properly
Updated
a year ago
Comments count
1
Clinker issue: Blocks instead of arrows
Updated
a year ago
Comments count
2
ValueError: not enough values to unpack (expected 2, got 1)
Updated
a year ago
Truncating the middle of gene clusters & gene group legend
Updated
a year ago
Comments count
2
Clink does not show any features
Updated
a year ago
Comments count
1
update 0.0.28
Updated
a year ago
Comments count
3
Use clinker to visualize individual exons rather than whole gene?
Updated
a year ago
How to visualize a gene on a large chromosome?
Closed
a year ago
the legend
Closed
a year ago
Comments count
4
protein groups and similarity
Closed
a year ago
Comments count
2
Can't save changes to session
Closed
a year ago
Comments count
2
Similarity score and plotting
Updated
a year ago
Comments count
1
Conda package errors
Closed
2 years ago
Comments count
3
Using clinker in windows Cmd shell, only alignement of last name sequences
Updated
2 years ago
Comments count
5
docs on gff+fasta
Updated
2 years ago
Comments count
2
Issue with running automatically on multiple files due to (BUTTON)clinker screen
Updated
2 years ago
Comments count
2
clustermap loading slow
Closed
2 years ago
Comments count
1
How to only generate html files?
Closed
2 years ago
Comments count
2
Clinker usage
Closed
2 years ago
Comments count
9
Export SVG instead of html
Updated
2 years ago
Feature request: set font style, link color and gene color
Updated
2 years ago
Questions
Updated
2 years ago
Circular sequence panning
Updated
2 years ago
How to load a session file ?
Closed
2 years ago
Comments count
2
ERROR in matrix.select
Closed
3 years ago
Comments count
2
cluster similarity matrix
Updated
3 years ago
Comments count
3
Running Clinker on a Server?
Closed
3 years ago
Comments count
3
Gene label type issue
Updated
3 years ago
gene model colouring issue
Updated
3 years ago
Comments count
1
Align Error: seq contains letters not in the alphabet
Closed
3 years ago
Comments count
2
Error in align
Closed
3 years ago
Comments count
5
Gene labels not extracting correctly
Updated
3 years ago
Elaborate on the input file contents
Closed
3 years ago
Comments count
4
[Feature request] option to indicate subsection of Genbank file
Updated
3 years ago
Comments count
3
Feature request: Showing mobile genetic elements in the figure
Updated
3 years ago
Feature Request: Incomplete/disrupted genes in the figure
Updated
3 years ago
Comments count
1
Feature Request: show gene label only for genes creating clusters
Updated
3 years ago
Error when using gff file as input
Updated
3 years ago
Groups are not restored during session loading
Closed
3 years ago
Comments count
2
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