Beast code in Giters

Gabriel Raulet's repositories

ELBARefactor

Testing refactored k-mer communication code

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AP

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ParallelCoverTree

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seqcomm

nucleotide sequence communication organization for combblas processor grids

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assembly_experiments

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autocli

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CoverPoints

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CoverTreeProject

Redo of ParallelCoverTree but with more modern C++ for better evaluation

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cs267-hw2-2

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cutils

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diBELLA.2D

Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly

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fasta_map

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find_chimera1

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grelba

This repository holds a lot of different ELBA snippets that I now have to integrate together

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CTree

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distpca_old

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fastrips

Building Rips complexes from point data, preferably in an efficient manner

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jlproject

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lambda_svd

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mpisvd

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nngraph

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nt

routines for 2-bit {en,de}coding of nucleotide sequences

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overlap-to-contig-prototype

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parfaidx

openmp parallel implementation of samtools faidx to practice openmp

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ParGraph

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seqds

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svd-benchmarks

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ullman_yannakakis

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uy

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xdrop_aligner

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