Wayne Fang's repositories
awesome-ggplot2
A curated list of awesome ggplot2 tutorials, packages etc.
BookChat
基于 Apache 2.0 开源协议进行开源的通用书籍阅读微信小程序.
CodonTilingPrimers
Create NNN primers tiling codons of a gene for codon mutagenesis
deephlapan
A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides and the potential immunogenicity of pMHC
deeplearning-biology
A list of deep learning implementations in biology
Dive-into-DL-PyTorch
Dive into Deep Learning (动手学深度学习) with PyTorch.
Dive-into-DL-TensorFlow2.0
本项目将《动手学深度学习》(Dive into Deep Learning)原书中的MXNet实现改为TensorFlow 2.0实现，项目已得到李沐老师的同意
dn
Daily notes command line tool
find_differential_primers
Code for design of diagnostic PCR primers, and metabarcoding markers.
ggplot2-book
ggplot2: elegant graphics for data analysis
h3agwas
GWAS Pipeline for H3Africa
kaiju
Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
kraken2
The second version of the Kraken taxonomic sequence classification system
LeetCodeAnimation
Demonstrate all the questions on LeetCode in the form of animation.（用动画的形式呈现解LeetCode题目的思路）
MixMHC2pred
HLA-II ligand predictor.
osync
A robust two way (bidirectional) file sync script based on rsync with fault tolerance, POSIX ACL support, time control and near realtime sync
pybioviz
bioinformatics visualization tools with pyviz/bokeh
pyGenomeTracks
python module to plot beautiful and highly customizable genome browser tracks
python-is-cool
Cool Python features for machine learning that I used to be too afraid to use
pytorch-cpp
C++ Implementation of PyTorch Tutorial for Deep Learning Researchers
pytorch-tutorial
PyTorch Tutorial for Deep Learning Researchers
see
:art: Visualisation toolbox for beautiful and publication-ready figures
sjstats
Statistical Functions for Regression Models
speciesprimer
The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacterial species in complex ecosystems.
systemPipeR
Project Website:
TCGAbiolinks
TCGAbiolinks
varcode
Library for manipulating genomic variants and predicting their effects