Installation
conda create -n organ_seg python
conda activate organ_seg
conda install pytorch pytorch-cuda=11.6 -c pytorch -c nvidia
pip install -r requirements.txt
Also install the packages under ../../src with pip install . in each.
Those are: github.com/funkelab/funlib.learn.torch github.com/funkelab/funlib.persistence github.com/funkelab/funlib.show.neuroglancer github.com/funkey/gunpowder