Funke lab's repositories
funlib.show.neuroglancer
Scripts and helpers for the neuroglancer WebGL viewer.
motile_napari_plugin
A napari plugin for tracking with motile
motile_toolbox
A toolbox for tracking with motile, including constructing candidate graphs and computing common features.
funlib.persistence
Interfaces for data (arrays and graphs) and storage formats (databases and file formats)
linajea_experiments
Cell Tracking Experiments Scripts
napari-cellulus
A napari plugin for cellulus
funlib.geometry
A package for Coordinates, Rois and common operations in Coordinate spaces
funlib.segment
Tools to segment graphs and volumes
latex_template
A minimal LaTeX document to be used as a template for papers.
spatial_graph
A spatial graph datastructure for python
stargan-v2
StarGAN v2 - Official PyTorch Implementation (CVPR 2020)
blinx_animation
animation of blinking in the style of 3blue1brown
blinx_paper
blinx paper
blinx_sparkle_stats
transformer models gone blinky
fictus.aggregatum
A dataset of fictional cells with protein aggregates.
napari
napari: a fast, interactive, multi-dimensional image viewer for python