fukunagatsu

Tsukasa Fukunaga's repositories

Language:C300

RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome analysis

Language:CMIT1600

Mirage is ancestral genome estimation software by considering different evolutionary patterns among gene families.

Language:C++300

Language:C++200

CapR calculates probabilities that each RNA base position is located within each secondary structural context for long RNA sequences.

Language:Objective-CMIT900

Logicome Profiler exhaustively detects statistically significant triplet logic relationships from a binary matrix dataset.

Language:C++200

RIblast_pv is a statistical significance assessment method for RNA-RNA interaction in long RNAs.

Language:C++MIT000

FAB-GMM estimates Gaussian Mixture Model (GMM) parameter based on Factorized Asymptotic Bayes (FAB) algorithm.

Language:C++600