ftencaten / r37_multiome

R37 single-cell Multiome (scRNA-seq+scATAC-seq)

Code for analysis of single-cell Multiome (scRNA-seq+scATAC-seq) from R37 study

This code includes:

• Pre-processing
• QC
• Doublet identification
• Peak recalling
• Dimension reduction and integration
• Exploratory plots
• DEGs analysis
• Cell-cell comunication