fritsche / Statistics

Uses PMCMRplus R package for Statistical tests

• Friedman

• Kruskal

To install dependencies

Ubuntu and Debian

PMCMRplus

Check for the header files by running the following commands outside of R from the console.

dpkg -p libgmp-dev
dpkg -p libmpfr-dev

If any (or both) of the above packages are missing, simply install the missing package(s) from the repository of your Linux distribution:

sudo apt-get install libgmp-dev
sudo apt-get install libmpfr-dev

After successful installation of the above Linux packages, repeat with the installation of the R package PMCMRplus from within R:

install.packages("PMCMRplus")

If mvtnorm R package is missing it is possible to install using Ubuntu ppa

# find the package
sudo apt search mvtnorm
# install it
sudo apt install r-cran-mvtnorm

scmamp

sudo apt-get -y build-dep libcurl4-gnutls-dev
sudo apt-get -y install libcurl4-gnutls-dev
sudo apt-get install libcurl4-openssl-dev libssl-dev

if (!require("devtools")) {
  install.packages("devtools")
}

devtools::install_github("b0rxa/scmamp")

More info: https://github.com/b0rxa/scmamp

For other distros

• https://cran.r-project.org/web/packages/PMCMRplus/readme/README.html