Frederik Coppens's starred repositories
ena-upload-container
This is a repository to build a Galaxy container which can be used to remove human traces from sequence reads and upload raw SARS-Cov-2 sequences to ENA.
ena-upload-cli
ENA upload tool - script your Open Data upload to the European Nucleotide Archive
ena-cog-uk-wfs
Collection of scripts for automated SARS-CoV-2 genome surveillance.
sars-cov-2-processing-requests
Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.
SARS-CoV-2
Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures
biotoolsSchema
biotoolsSchema : Tool description data model for computational tools in life sciences
training-material
A collection of Galaxy-related training material