for-giobbe

BASE

Pronunced /'baze/ - is a tool which allows to integrate non-ubiquitous genes in comparative genomics analyses for selection.

phy

Teaching assistantship for the "Molecular Phylogenetics" classes of the MSc in Bioinformatics at the University of Bologna.

lcWGS

a_primer_on_comparative_methods

ancestral_baits_pipeline

bacillus_cryptic_persistence

Here we investigate the fate of genes and gene regulatory networks associated with male gonads of a bisexual species in closely related parthenogens.

bacillus_spp_rna

Code related to a project focused on the study of trait loss in the Bacillus spp. complex.

bash-guide

A guide to learn bash

for-giobbe.github.io

gene-transcriptional-profiles-in-automictic-taxa

Gene transcriptional profiles in gonads of Bacillus taxa (Phasmida) with different cytological mechanisms of automictic parthenogenesis.

mitoRNA

Target assembler from RNA-Seq and starting reference(s) - used for mining mitogenomes from the SRA.

notostraca_comparative_genomics

project on comparative genomics of notostraca (Crustacea : branchiopoda) species.

PAINT

Plant Ant INTeraction

Rphy

Teaching assistantship for the "Molecular Phylogenetics" classes of the MSc in Biodiversity and Evolution at the University of Bologna.

enterobacterales

code repo for manuscript

notostraca

stasis