folkehelseinstituttet / X-factor-ART

Supplementary Materials and code used in the Xchrom publication

X-factor-ART

This repository contains all the scripts, data, figures, and visualizations that support the text in the publication:

Romanowska, J., Nustad, H.E., Page, C.M. et al. The X-factor in ART: does the use of assisted reproductive technologies influence DNA methylation on the X chromosome? Hum Genomics 17, 35 (2023).

Note that not all the output and data can be published here due to sensitive nature of DNA methylation and other variables in our dataset.

If you want, you can browse the raw code here.

Check this nice overview of all the significant single-CpG findings as well as significant DMRs (differentially methylated regions).

SCRIPTS

Check README inside the folder for more info.

DATA

Check README inside the folder for more info.

FIGURES

All the figures that were created during analyses.