Felix Meyenhofer's repositories
abapi-jclient
Java client for the Allen Bain RESTful API
bigdataviewer-bioformats
Opens bioformat images in BigDataViewer
bigdataviewer_scijava
Scijava commands for starting BigDataViewer and exporting data.
bioformats
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
NanoZoomer-J
ImageJ plugin for handling NDPI files.
hcs-webinar-notebooks
Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar
hrm_installer
Set of bash scripts for the automated installation and setup of the Huygens Remote Manager.
intellij-ij-scripting
Code in IntelliJ, run in Fiji (is just ImageJ)
Mandelbrot-set-explorer
An interactive Mandelbrot set, made with Python3 and Tkinter
matconsolectl
Control MATLAB from Java, forked from matlabcontrol
matlabcontrol
matlabcontrol is a Java API that allows for calling MATLAB from Java. You can eval, feval, as well as get and set variables. Interaction can be performed from either inside MATLAB or outside MATLAB.
ome-documentation
Sphinx-based documentation for the Open Microscopy Environment
omero-user-scripts_unifr
Plugins for OMERO
openmicroscopy
OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded by private and public research grants, OME has been a major force on the international microscopy stage since 2000.
SwissBIAS.github.io
Website for the SwissBIAS network: Swiss BioImage Analysts' network