florianorgeret / GeoPressureManual

Learn how to use GeoPressureR with examples.

GeoPressureManual

The GeoPressureManual is a great place to start learning about how to use GeoPressureR, the R package which help researchers construct the trajectory of a bird equiped with an atmospheric pressure sensor.

Using the examples of a Swainson's Warbler and a Great Reed Warbler, this user guide takes you through each step of the analysis in detail.

Table of content

• Introduction
• Basic tutorial
  • 1 Tag object
  • 2 Pressure map
  • 3 Trajectory
• Advanced tutorial
  • 4 Light map
  • 5 Trajectory with wind
• Labelling tools
  • 6 Pressurepath
  • 7 GeoPressureViz
  • 8 Labelling tracks
• 9 Resources
• Appendix
  • A Export and Visual
  • B Probability aggregation

Start your own study

Once you are familiar with the overall workflow of geolocation by pressure and are ready to analyse your own data, the GeoPressureTemplate provides an ideal starting project, with standard folder structure, default configuration and analysis file and much more.

How to cite?

Raphaël & Améline Nussbaumer. (2024). Rafnuss/GeoPressureManual. Zenodo. 10.5281/zenodo.10799355

Contributing to GeoPressureManual

Thanks for your interest! Here's a concise guide to help you contribute effectively.

1. Setup

• Fork the repo to your GitHub.
• Clone your fork.
• Create a branch for your edits.

2. Content Edits

• Follow bookdown syntax.
• Keep style and structure consistent (use styler).

3. Local Testing

• Build with bookdown::render_book() to catch issues.

4. Submit Changes

• Commit with a clear message.
• Push to your fork.
• Open a Pull Request (PR). Describe your changes.