fishinwind's repositories

3d-genome-processing-tutorial

A 3D genome data processing tutorial for ISMB/ECCB 2017

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anvio

An analysis and visualization platform for 'omics data

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awesome-tensorflow

TensorFlow - A curated list of dedicated resources http://tensorflow.org

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bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

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bioconda-recipes

Conda recipes for the bioconda channel.

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DataScienceSpecialization.github.io

http://DataScienceSpecialization.github.io

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dataviz

A book covering the fundamentals of data visualization.

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deep-learning-coursera

Deep Learning Specialization by Andrew Ng on Coursera.

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GitInPractice

📖 An opinionated intermediate/advanced Git book from @MikeMcQuaid

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hangzhou_house_knowledge

2017年买房经历总结出来的买房购房知识分享给大家,希望对大家有所帮助。买房不易,且买且珍惜。Sharing the knowledge of buy an own house that according to the experience at hangzhou in 2017 to all the people. It's not easy to buy a own house, so I hope that it would be useful to everyone.

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Haystack

Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline

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hpc-intro

Intro to HPC lesson materials

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hpc-python

HPC Python lesson materials

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In-depth-NGS-Data-Analysis-Course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

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labs

Rmd source files for the HarvardX series PH525x

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Learn-Pandas

Tutorials on how to use pandas effectively to do data analysis

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learning_bam_file

Learning the Sequence Alignment/Map format

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pathoscore

pathoscore evaluates variant pathogenicity tools and scores.

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piPipes

piRNA pipeline collection developed in the Zamore Lab and ZLab in UMass Med School

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Probabilistic-Programming-and-Bayesian-Methods-for-Hackers

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

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scRNA.seq.course

Analysis of single cell RNA-seq data course, Cambridge University, UK

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statistical-learning

Lecture Slides and R Sessions for Trevor Hastie and Rob Tibshinari's "Statistical Learning" Stanford course

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TCGAsurvival

Scripts to analyze TCGA data

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TeensyStep

Fast Stepper Motor Library for Teensy boards

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Tools4RR

Materials for a one-credit course on reproducible research

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tRNA_ngs_mod_map_call_galaxy

Tool collection for identification of tRNA modifications from NGS data galaxy workflow

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workshops

Bioconnector Workshops

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