Fish-on-plate's repositories
OpenOpticalFlow
OpenOpticalFlow is an open source optical flow program in Matlab for extraction of high-resolution velocity fields from various flow visualization images.
vmd_diffusion_coefficient
Computing Diffusion Coefficients in Macromolecular Simulations: The Diffusion Coefficient Tool for VMD
Sea
Anything
u-track
Multiple-particle tracking designed to (1) track dense particle fields, (2) close gaps in particle trajectories resulting from detection failure, and (3) capture particle merging and splitting events resulting from occlusion or genuine aggregation and dissociation events
simpletracker
A simple particle tracking algorithm for MATLAB that can deal with gaps.
RLOFLib
Robust Local Optical Flow (RLOF)
msdanalyzer
A MATLAB class for Mean Square Displacement analysis.
imagej-ncratio
ImageJ macro for calculation of nuclear to cytoplasmic ratio