Kristen Finch's repositories
cookbook
This repo is for a cookbook of my recipes.
Docker_kr-colab_locator
Docker container for locator NN. See: https://github.com/kr-colab/locator.git
Docker_Rpackage_synbreed
Docker container built to run the deprecated R package synbreed https://synbreed.r-forge.r-project.org/
Docker_SNPhylo
A pipeline to generate a phylogenetic tree from huge SNP data
gatk_vcf
GATK vcf workflow. UW Biology Wasser Lab.
hyak-code-server
connect VS Code (code-server) to HYAK klone via docker container
hyak-fsl
FSL container built for UW HYAK users
InspirationDisseminationSchedule
Code to create the schedule and dossiers for Inspiration Dissemination
locator
deep learning prediction of geographic location from individual genome sequences
tutorial_DAPC_ADMIXTURE
Tutorial demonstrating DAPC and ADMIXTURE visualizations with genomic data (SNPs)
locator_weighted
clararehmann version of locator with weighted_samples
mass_filter
tools for filtering mass spectrometry data files
R_functions
functions and stuff
UWrc.github.io
The best research computing website in all the land.