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Fidel Ramirez (fidelram)

fidelram

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Company:Boehringer Ingelheim Pharma GmbH & Co. KG

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Fidel Ramirez's repositories

goatools

Python scripts to find enrichment of GO terms

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pyBigWig

A python extension for quick access to bigWig files

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bioconda-recipes

Conda recipes for the bioconda channel.

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cellxgene-gateway

Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.

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DBG2OLC

The genome assembler that reduces the computational time of human genome assembly from 400,000 CPU hours to 2,000 CPU hours, utilizing long erroneous 3GS sequencing reads and short accurate NGS sequencing reads.

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log.bio

Log command line events to a graph database :)

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matplotlib

matplotlib: plotting with Python

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scanpy

Single-Cell Analysis in Python. Scales to >1M cells.

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scanpy-tutorials

Scanpy Tutorials.

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scanpy_usage

Scanpy use cases.

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scvelo

Stochastic Single Cell RNA Velocity

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sphinx-argparse

Sphinx extension that automatically document argparse commands and options

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